STAFF
ITIS staff image 2025
RUFF, TOBIAS

Tobias Ruff

PhD, Project Leader

Neural Systems

 

Google Scholar
https://orcid.org/0000-0003-3565-5480

 

Tobias Ruff was born in Germany.

Tobias joined the IT’IS Foundation in October 2024. He studied chemistry and biochemistry at Ludwig Maximilian University of Munich, and completed his PhD at the Max Planck Institute of Neurobiology, where he investigated the role of Fibronectin Leucine-Rich Transmembrane (FLRT) receptors in cortical development and retinal circuit formation.

After his PhD, Tobias joined the laboratory of János Vörös at ETH Zurich as a Human Frontier Science Program (HFSP)-funded postdoctoral researcher. There, he led interdisciplinary work at the interface of neuroscience, bioelectronics, and neuroengineering to develop a biohybrid neural interface with living neurons for targeted, high-resolution stimulation of the visual system, with the aim of restoring vision. His work integrated stem cell-derived neural systems, high-density microelectrode arrays, microfluidics, and the fabrication of stretchable electrode arrays.

At the IT’IS Foundation, Tobias’s current focus is on fundamental research related to temporal interference (TI) stimulation. He serves as a bridge between engineering and biology in external and internal collaborations, leading the integration of in vitro neural models and experimental design.

 

 

PUBLICATION LIST

Peer-reviewed articles

Amos, G., Vasiliauskaitė, V., Duru, J., Azevedo Saramago, M.L., Schmid, T., Suter, A., Torren, F.C., Küchler, J., Ruff, T., Vörös, J. & Vulić, K. An integrated in vitro platform and biophysical modeling approach for studying synaptic transmission in isolated neuronal pairs. iScience, 29(5):115488, 2026, doi:10.1016/j.isci.2026.115488
Maurer, B., Fassbind, S., Ruff, T., Duru, J., Spacone, G., Rodde, T., Vörös, J. & Ihle, S.J. Inkube: An all-in-one solution for neuron culturing, electrophysiology, and fluidic exchange. Lab on a Chip, 26(6):2074-2089, 2026, doi:10.1039/D5LC00971E
Chun, S.H., Yoon, D.E., Diaz Almeida, D.S., Todorov, M.I., Straub, T., Ruff, T., Shao, W., Yang, J., Seyit-Bremer, G., Shen, Y.R., Ertürk, A., Del Toro, D., Shi, S. & Klein, R. Cortex folding by combined progenitor expansion and adhesion-controlled neuronal migration. Nature Communications, 16(1):8048, 2025, doi:10.1038/s41467-025-62858-9
Clément, B.F., Petrella, L., Wallimann, L., Duru, J., Tringides, C.M., Vörös, J. & Ruff, T. An in vitro platform for characterizing axonal electrophysiology of individual human iPSC-derived nociceptors. Biosensors and Bioelectronics, 281:117418, 2025, doi:10.1016/j.bios.2025.117418
Sifringer, L., Fratzl, A., Clément, B.F., Chansoria, P., Mönkemöller, L.S., Duru, J., Ihle, S.J., Steffens, S., Beltraminelli, A., Ceylan, E., Hengsteler, J., Maurer, B., Weaver, S.M., Tringides, C.M., Vulić, K., Madduri, S., Zenobi‐Wong, M., Roska, B., Vörös, J. & Ruff, T. An implantable biohybrid neural interface toward synaptic deep brain stimulation. Advanced Functional Materials, 35(12):2416557, 2025, doi:10.1002/adfm.202416557
Sifringer, L., Fratzl, A., Clément, B.F., Chansoria, P., Mönkemöller, L.S., Duru, J., Ihle, S.J., Steffens, S., Beltraminelli, A., Ceylan, E., Hengsteler, J., Maurer, B., Weaver, S.M., Tringides, C.M., Vulić, K., Madduri, S., Zenobi‐Wong, M., Roska, B., Vörös, J. & Ruff, T. An implantable biohybrid neural interface toward synaptic deep brain stimulation. Advanced Functional Materials, 35(12):2416557, 2025, doi:10.1002/adfm.202416557
Amos, G., Ihle, S.J., Clément, B.F., Duru, J., Girardin, S., Maurer, B., Delipinar, T., Vörös, J. & Ruff, T. Engineering an in vitro retinothalamic nerve model. Frontiers in Neuroscience, 18:1396966, 2024, doi:10.3389/fnins.2024.1396966
Duru, J., Maurer, B., Ruff, T., Vulić, K., Hengsteler, J., Girardin, S., Vörös, J. & Ihle, S.J. A modular and flexible open source cell incubator system for mobile and stationary use. HardwareX, 20:e00571, 2024, doi:10.1016/j.ohx.2024.e00571
Vulić, K., Amos, G., Ruff, T., Kasm, R., Ihle, S.J., Küchler, J., Vörös, J. & Weaver, S. Impact of microchannel width on axons for brain-on-chip applications. Lab on a Chip, 24(22):5155-5166, 2024, doi:10.1039/D4LC00440J
Duru, J., Maurer, B., Giles Doran, C., Jelitto, R., Küchler, J., Ihle, S.J., Ruff, T., John, R., Genocchi, B. & Vörös, J. Investigation of the input-output relationship of engineered neural networks using high-density microelectrode arrays. Biosensors and Bioelectronics, 239:115591, 2023, doi:10.1016/j.bios.2023.115591
Girardin, S., Ihle, S.J., Menghini, A., Krubner, M., Tognola, L., Duru, J., Fruh, I., Müller, M., Ruff, T. & Vörös, J. Engineering circuits of human iPSC-derived neurons and rat primary glia. Frontiers in Neuroscience, 17:1103437, 2023, doi:10.3389/fnins.2023.1103437
Duru, J., Küchler, J., Ihle, S.J., Forró, C., Bernardi, A., Girardin, S., Hengsteler, J., Wheeler, S., Vörös, J. & Ruff, T. Engineered biological neural networks on high density CMOS microelectrode arrays. Frontiers in Neuroscience, 16:829884, 2022, doi:10.3389/fnins.2022.829884
Girardin, S., Clément, B., Ihle, S.J., Weaver, S., Petr, J.B., Mateus, J.C., Duru, J., Krubner, M., Forró, C., Ruff, T., Fruh, I., Müller, M. & Vörös, J. Topologically controlled circuits of human iPSC-derived neurons for electrophysiology recordings. Lab on a Chip, 22(7):1386-1403, 2022, doi:10.1039/D1LC01110C
Ihle, S.J., Girardin, S., Felder, T., Ruff, T., Hengsteler, J., Duru, J., Weaver, S., Forró, C. & Vörös, J. An experimental paradigm to investigate stimulation dependent activity in topologically constrained neuronal networks. Biosensors and Bioelectronics, 201:113896, 2022, doi:10.1016/j.bios.2021.113896
Llerena Zambrano, B., Renz, A.F., Ruff, T., Lienemann, S., Tybrandt, K., Vörös, J. & Lee, J. Soft electronics based on stretchable and conductive nanocomposites for biomedical applications. Advanced Healthcare Materials, 10(3):2001397, 2021, doi:10.1002/adhm.202001397
Ruff, T., Peters, C., Matsumoto, A., Ihle, S.J., Morales, P.A., Gaitanos, L., Yonehara, K., Del Toro, D. & Klein, R. FLRT3 marks direction-selective retinal ganglion cells that project to the medial terminal nucleus. Frontiers in Molecular Neuroscience, 14:790466, 2021, doi:10.3389/fnmol.2021.790466
Del Toro, D., Carrasquero-Ordaz, M.A., Chu, A., Ruff, T., Shahin, M., Jackson, V.A., Chavent, M., Berbeira-Santana, M., Seyit-Bremer, G., Brignani, S., Kaufmann, R., Lowe, E., Klein, R. & Seiradake, E. Structural basis of teneurin-latrophilin interaction in repulsive guidance of migrating neurons. Cell, 180(2):323-339.e19, 2020, doi:10.1016/j.cell.2019.12.014
Del Toro, D., Ruff, T., Cederfjäll, E., Villalba, A., Seyit-Bremer, G., Borrell, V. & Klein, R. Regulation of cerebral cortex folding by controlling neuronal migration via FLRT adhesion molecules. Cell, 169(4):621-635.e16, 2017, doi:10.1016/j.cell.2017.04.012
Seiradake, E., Del Toro, D., Nagel, D., Cop, F., Härtl, R., Ruff, T., Seyit-Bremer, G., Harlos, K., Border, E., Acker-Palmer, A., Jones, E. & Klein, R. FLRT structure: Balancing repulsion and cell adhesion in cortical and vascular development. Neuron, 84(2):370-385, 2014, doi:10.1016/j.neuron.2014.10.008

 

Preprint articles

Clément, B.F., Osselaer, T., Zhang, C., Paccagnan, G., Ruff, T. & Vörös, J. A three-compartment microfluidic platform for investigating signal transmission in the human sensory pathway. bioRxiv, 2026, doi:10.64898/2026.01.06.698004
Maurer, B., Vasiliauskaitė, V., Hengsteler, J., Cathomen, G., Ruff, T., Schmid, C., Vörös, J. & Ihle, S.J. Reinforcement learning for closed-loop optimisation of spatiotemporal stimulation in patterned neuronal networks. bioRxiv, 2026, doi:10.64898/2026.04.14.718383
Clément, B.F., Pfister, C., Kurer, T., Labouesse, C., Deshmukh, D.V., Hengsteler, J., Lehmann, J., Paganella, L.G., Ruff, T., Dranseika, V., Weaver, S., Sommer, L., Tibbitt, M.W., Vörös, J. & Tringides, C.M. HydroMEA: A 3D Hydrogel based microfluidic device to study electrophysiology for myelinated nerve-on-chip. bioRxiv, 2025, doi:10.1101/2025.07.24.666400
Connolly, S., Vulić, K., Zare-Eelanjegh, E., Simonett, M., Duru, J., Ruff, T., Clément, B.F. & Vörös, J. Constructing well-defined neural networks of multiple cell types by picking and placing of neuronal spheroids using FluidFM. bioRxiv, 2024, doi:10.1101/2024.09.03.610979
Sifringer, L., Fratzl, A., Clément, B.F., Chansoria, P., Mönkemöller, L.S., Duru, J., Ihle, S.J., Steffens, S., Beltraminelli, A., Ceylan, E., Hengsteler, J., Maurer, B., Weaver, S.M., Tringides, C.M., Vulić, K., Madduri, S., Zenobi-Wong, M., Roska, B., Vörös, J. & Ruff, T. An implantable biohybrid nerve model towards synaptic deep brain stimulation. bioRxiv, 2024, doi:10.1101/2024.05.31.596665

 

Conference proceedings and program abstracts

Cassarà, A.M., Karimi, F., Newton, T.H., Capstick, M.H., Kuster, N., Neufeld, E. & Ruff, T. In silico safety investigation of temporal interference stimulation and electric stimulation in the presence of implants. Brain Stimulation 2025, 18:296, doi:10.1016/j.brs.2024.12.244
Karimi, F., Ruff, T., Vörös, J., Kuster, N., Neufeld, E. & Newton, T.H. Mechanistic Insights into Temporal Interference Stimulation from Computational models and human iPSC-Based Networks. , Bernstein Conference 2025
Sifringer, L., Fratzl, A., Clément, B.F., Chansoria, P., Mönkemöller, L.S., Duru, J., Ihle, S.J., Steffens, S., Beltraminelli, A., Ceylan, E., Hengsteler, J., Maurer, B., Weaver, S.M., Tringides, C.M., Vulić, K., Madduri, S., Zenobi-Wong, M., Roska, B., Vörös, J. & Ruff, T. An implantable biohybrid neural interface towards synaptic deep brain stimulation. In Abstract Collection of the Swiss Society for Neuroscience 25th Annual Meeting (SSN 2025), Lausanne, Switzerland, February 6–7, 2025, pages 53, SSN 2025
Sifringer, L., Fratzl, A., Clément, B.F., Chansoria, P., Mönkemöller, L.S., Duru, J., Ihle, S.J., Steffens, S., Beltraminelli, A., Ceylan, E., Hengsteler, J., Maurer, B., Weaver, S.M., Tringides, C.M., Vulić, K., Madduri, S., Zenobi-Wong, M., Roska, B., Vörös, J. & Ruff, T. An implantable biohybrid neural interface towards synaptic deep brain stimulation. In Abstract Collection of the Swiss Society for Neuroscience 25th Annual Meeting (SSN 2025), pages 53

 

Thesis

Ruff, T. FLRTs: Regulator of cerebral cortex folding and a potential RGC marker in the mouse retina. Ludwig-Maximilians-Universität München, 2018, doi:10.5282/EDOC.23182

 
 
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